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Every expected shard must match the manifest and provide its assigned phenotype results. Multiple-testing correction is then applied once across all successful associations.

Usage

combine_phewas_shards(
  config,
  manifest_path = NULL,
  bundle_directory = NULL,
  overwrite = FALSE
)

Arguments

config

A configuration path or normalized config object.

manifest_path

Optional manifest TSV path.

bundle_directory

Destination result directory. Defaults to the configured output directory.

overwrite

Replace any existing results in the destination.

Value

The combined phewas_result object.