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Results are published as an atomic RDS artifact. A valid existing artifact is reused unless overwrite is true.

Usage

run_phewas_shard(config, shard_id, manifest_path = NULL, overwrite = FALSE)

Arguments

config

A configuration path or normalized config object.

shard_id

Positive shard number, commonly SLURM_ARRAY_TASK_ID.

manifest_path

Optional manifest TSV path.

overwrite

Refit and replace a valid existing artifact.

Value

The shard artifact path, invisibly.